Journal:

Article Title: Genetic Heterogeneity of Clinical Strains of Yersinia enterocolitica Traced by Ribotyping and Relationships between Ribotypes, Serotypes, and Biotypes

doi:

Figure Lengend Snippet: Relationships among ribotypes, serotypes, and biotypes of Y. enterocolitica strains

Article Snippet: The remaining 10 strains were from other collections, representing pathogenic and nonpathogenic biogroups, and were used as reference strains. table ft1 table-wrap mode="anchored" t5 TABLE 1 caption a7 Ribotype with: CRT Serotype Biotype No. of clinical strains Yr(s) of isolation Reference strain designation a Hin dIII Bgl I PCR H1 B1 SR1 I-1 O:3 BT4 30 b 1984–1995 CECT 500 O:3 BT2 3 1995 O:3 BT3 1 1995 SR2 I-2 O:3 BT4 5 1994–1995 O:3 BT2 2 1995 O:3 BT3 1 1995 SR3 I-3 O:3 BT4 2 1994–1995 O:3 BT3 1 1994 SR4 I-4 O:3 BT4 1 1995 SR5 I-5 O:3 BT4 1 1995 SR6 I-6 O:3 BT3 1 1993 H1 B4 SR1 II-1 O:3 BT4 1 b 1985 CECT 4055 SR2 II-2 O:3 BT4 1 1995 H1 B6 SR1 III O:3 BT4 2 1995 O:3 BT2 1 1995 H2 B2 SR1 IV O:3 BT4 1 b 1984 H3 B3 SR7 V O:3 BT4 1 b 1984 H4 B5 SR1 VI O:3 BT4 1 b 1986 H5 B1 SR1 VII O:3 BT4 1 b 1986 H6 B1 SR1 VIII O:3 BT4 5 b 1992–1995 H6 B4 SR1 IX O:3 BT4 1 b 1992 H7 B4 SR1 X O:3 BT4 1 1994 H8 B1 SR1 XI O:3 BT4 2 1995 H21 B21 SR21 XII-21 NA BT1A 1 1993 O:1,2 BT2 1 1993 SR22 XII-22 NA BT1A 2 1993 NA BT2 2 1993 SR26 XII-26 O:5 BT1A CLSP:A/95 H21 B25 SR24 XIII-24 O:9 BT2 1 1994 2-69 Hellsinky c SR25 XIII-25 O:8 BT2 ATCC 27729 SR26 XIII-26 O:21 BT1Ax Wc188 New York c O:4,32 BT1Ax 6249 New York c H22 B22 SR23 XIV NA BT2 1 1993 H23 B23 SR1 XV O:1,2a,3 BT3 CECT 559 H24 B24 SR1 XVI O:8 BT2 1 1994 CECT 4054 H25 B25 SR25 XVII O:13,7 BT1Ax 81-Y Barcelona c Open in a separate window a CECT, Colección Española de Cultivos Tipo; CLSP, Colección del Laboratorio de Salud Pública del Principado de Asturias. b Includes a strain collected before 1993 in a hospital of the Principality of Asturias. c Reference strains kindly provided by R. Diaz, Hospital Universitario de Navarra, Pamplona, Spain.

Techniques: Isolation

Journal:

Article Title: Genetic Heterogeneity of Clinical Strains of Yersinia enterocolitica Traced by Ribotyping and Relationships between Ribotypes, Serotypes, and Biotypes

doi:

Figure Lengend Snippet: Ribotypes generated by HindIII in Y. enterocolitica strains of different serotypes and biotypes. Lanes A to D and F to H, ribotypes shown only by O:3–BT4 strains. Lane E, ribotype shown by O:3–BT2, O:3–BT3, and O:3–BT4 strains. Lanes I and J, ribotypes shown by O:1,2a,3–BT3 and O:8–BT2 strains, respectively. Lane K, ribotype shown by O:1,2–BT2, O:4,32–BT1Ax, O:5–BT1A, O:8–BT2, O:9–BT2, O:21–BT1Ax, and NA–BT1A strains. Lanes L and M, ribotypes shown by O:13,7–BT1Ax and NA–BT2 strains, respectively. Data for the clinical and reference strains corresponding to each H ribotype are presented in Table ​Table11.

Article Snippet: The remaining 10 strains were from other collections, representing pathogenic and nonpathogenic biogroups, and were used as reference strains. table ft1 table-wrap mode="anchored" t5 TABLE 1 caption a7 Ribotype with: CRT Serotype Biotype No. of clinical strains Yr(s) of isolation Reference strain designation a Hin dIII Bgl I PCR H1 B1 SR1 I-1 O:3 BT4 30 b 1984–1995 CECT 500 O:3 BT2 3 1995 O:3 BT3 1 1995 SR2 I-2 O:3 BT4 5 1994–1995 O:3 BT2 2 1995 O:3 BT3 1 1995 SR3 I-3 O:3 BT4 2 1994–1995 O:3 BT3 1 1994 SR4 I-4 O:3 BT4 1 1995 SR5 I-5 O:3 BT4 1 1995 SR6 I-6 O:3 BT3 1 1993 H1 B4 SR1 II-1 O:3 BT4 1 b 1985 CECT 4055 SR2 II-2 O:3 BT4 1 1995 H1 B6 SR1 III O:3 BT4 2 1995 O:3 BT2 1 1995 H2 B2 SR1 IV O:3 BT4 1 b 1984 H3 B3 SR7 V O:3 BT4 1 b 1984 H4 B5 SR1 VI O:3 BT4 1 b 1986 H5 B1 SR1 VII O:3 BT4 1 b 1986 H6 B1 SR1 VIII O:3 BT4 5 b 1992–1995 H6 B4 SR1 IX O:3 BT4 1 b 1992 H7 B4 SR1 X O:3 BT4 1 1994 H8 B1 SR1 XI O:3 BT4 2 1995 H21 B21 SR21 XII-21 NA BT1A 1 1993 O:1,2 BT2 1 1993 SR22 XII-22 NA BT1A 2 1993 NA BT2 2 1993 SR26 XII-26 O:5 BT1A CLSP:A/95 H21 B25 SR24 XIII-24 O:9 BT2 1 1994 2-69 Hellsinky c SR25 XIII-25 O:8 BT2 ATCC 27729 SR26 XIII-26 O:21 BT1Ax Wc188 New York c O:4,32 BT1Ax 6249 New York c H22 B22 SR23 XIV NA BT2 1 1993 H23 B23 SR1 XV O:1,2a,3 BT3 CECT 559 H24 B24 SR1 XVI O:8 BT2 1 1994 CECT 4054 H25 B25 SR25 XVII O:13,7 BT1Ax 81-Y Barcelona c Open in a separate window a CECT, Colección Española de Cultivos Tipo; CLSP, Colección del Laboratorio de Salud Pública del Principado de Asturias. b Includes a strain collected before 1993 in a hospital of the Principality of Asturias. c Reference strains kindly provided by R. Diaz, Hospital Universitario de Navarra, Pamplona, Spain.

Techniques: Generated

Journal:

Article Title: Genetic Heterogeneity of Clinical Strains of Yersinia enterocolitica Traced by Ribotyping and Relationships between Ribotypes, Serotypes, and Biotypes

doi:

Figure Lengend Snippet: Ribotypes generated by BglI in Y. enterocolitica strains of different serotypes and biotypes. Lane A, ribotype shown by O:3–BT2, O:3–BT3, and O:3–BT4 strains. Lanes B to F, ribotypes shown only by O:3–BT4 strains. Lane G, ribotype shown by O:1,2–BT2, O:5–BT1A, NA–BT1A, and NA–BT2 strains. Lane H, ribotype shown by O:4,32–BT1Ax, O:8–BT2, O:9–BT2, O:13,7–BT1Ax, and O:21–BT1Ax strains. Lanes I to K, ribotypes shown by O:1,2a,3–BT3, O:8–BT2, and NA–BT2 strains, respectively. Data for the clinical and reference strains corresponding each B ribotype are presented in Table ​Table11.

Article Snippet: The remaining 10 strains were from other collections, representing pathogenic and nonpathogenic biogroups, and were used as reference strains. table ft1 table-wrap mode="anchored" t5 TABLE 1 caption a7 Ribotype with: CRT Serotype Biotype No. of clinical strains Yr(s) of isolation Reference strain designation a Hin dIII Bgl I PCR H1 B1 SR1 I-1 O:3 BT4 30 b 1984–1995 CECT 500 O:3 BT2 3 1995 O:3 BT3 1 1995 SR2 I-2 O:3 BT4 5 1994–1995 O:3 BT2 2 1995 O:3 BT3 1 1995 SR3 I-3 O:3 BT4 2 1994–1995 O:3 BT3 1 1994 SR4 I-4 O:3 BT4 1 1995 SR5 I-5 O:3 BT4 1 1995 SR6 I-6 O:3 BT3 1 1993 H1 B4 SR1 II-1 O:3 BT4 1 b 1985 CECT 4055 SR2 II-2 O:3 BT4 1 1995 H1 B6 SR1 III O:3 BT4 2 1995 O:3 BT2 1 1995 H2 B2 SR1 IV O:3 BT4 1 b 1984 H3 B3 SR7 V O:3 BT4 1 b 1984 H4 B5 SR1 VI O:3 BT4 1 b 1986 H5 B1 SR1 VII O:3 BT4 1 b 1986 H6 B1 SR1 VIII O:3 BT4 5 b 1992–1995 H6 B4 SR1 IX O:3 BT4 1 b 1992 H7 B4 SR1 X O:3 BT4 1 1994 H8 B1 SR1 XI O:3 BT4 2 1995 H21 B21 SR21 XII-21 NA BT1A 1 1993 O:1,2 BT2 1 1993 SR22 XII-22 NA BT1A 2 1993 NA BT2 2 1993 SR26 XII-26 O:5 BT1A CLSP:A/95 H21 B25 SR24 XIII-24 O:9 BT2 1 1994 2-69 Hellsinky c SR25 XIII-25 O:8 BT2 ATCC 27729 SR26 XIII-26 O:21 BT1Ax Wc188 New York c O:4,32 BT1Ax 6249 New York c H22 B22 SR23 XIV NA BT2 1 1993 H23 B23 SR1 XV O:1,2a,3 BT3 CECT 559 H24 B24 SR1 XVI O:8 BT2 1 1994 CECT 4054 H25 B25 SR25 XVII O:13,7 BT1Ax 81-Y Barcelona c Open in a separate window a CECT, Colección Española de Cultivos Tipo; CLSP, Colección del Laboratorio de Salud Pública del Principado de Asturias. b Includes a strain collected before 1993 in a hospital of the Principality of Asturias. c Reference strains kindly provided by R. Diaz, Hospital Universitario de Navarra, Pamplona, Spain.

Techniques: Generated

Journal:

Article Title: Genetic Heterogeneity of Clinical Strains of Yersinia enterocolitica Traced by Ribotyping and Relationships between Ribotypes, Serotypes, and Biotypes

doi:

Figure Lengend Snippet: Ribotypes generated by PCR amplification using primers for conserved regions of 16S and 23S rRNA genes in Y. enterocolitica. Lane A, ribotype shown by O:3–BT2, O:3–BT3, O:3–BT4, O:1,2a,3–BT3, and O:8–BT2 strains. Lane B, ribotype shown by O:3–BT2, O:3–BT3, and O:3–BT4 strains. Lane C, ribotype shown by O:3–BT2 and O:3–BT3 strains. Lanes D, E, and G, ribotype shown by O:3–BT4 strains. Lane F, ribotype shown by one O:3–BT3 strain. Lane H, ribotype shown by O:1,2–BT2 and NA–BT1A strains. Lane I, NA–BT1A and NA–BT2 strains. Lane J, ribotype shown by one NA–BT2 strain. Lane K, ribotype shown by O:9–BT2 strains. Lane L, ribotype shown by O:8–BT2 and O:13,7–BT1Ax strains. Lane M, ribotype shown by O:4,32–BT1Ax and O:21–BT1Ax strains. Lanes P, DNA of phage lambda cleaved with PstI. Data for the clinical and reference strains corresponding to each ribotype are presented in Table ​Table11.

Article Snippet: The remaining 10 strains were from other collections, representing pathogenic and nonpathogenic biogroups, and were used as reference strains. table ft1 table-wrap mode="anchored" t5 TABLE 1 caption a7 Ribotype with: CRT Serotype Biotype No. of clinical strains Yr(s) of isolation Reference strain designation a Hin dIII Bgl I PCR H1 B1 SR1 I-1 O:3 BT4 30 b 1984–1995 CECT 500 O:3 BT2 3 1995 O:3 BT3 1 1995 SR2 I-2 O:3 BT4 5 1994–1995 O:3 BT2 2 1995 O:3 BT3 1 1995 SR3 I-3 O:3 BT4 2 1994–1995 O:3 BT3 1 1994 SR4 I-4 O:3 BT4 1 1995 SR5 I-5 O:3 BT4 1 1995 SR6 I-6 O:3 BT3 1 1993 H1 B4 SR1 II-1 O:3 BT4 1 b 1985 CECT 4055 SR2 II-2 O:3 BT4 1 1995 H1 B6 SR1 III O:3 BT4 2 1995 O:3 BT2 1 1995 H2 B2 SR1 IV O:3 BT4 1 b 1984 H3 B3 SR7 V O:3 BT4 1 b 1984 H4 B5 SR1 VI O:3 BT4 1 b 1986 H5 B1 SR1 VII O:3 BT4 1 b 1986 H6 B1 SR1 VIII O:3 BT4 5 b 1992–1995 H6 B4 SR1 IX O:3 BT4 1 b 1992 H7 B4 SR1 X O:3 BT4 1 1994 H8 B1 SR1 XI O:3 BT4 2 1995 H21 B21 SR21 XII-21 NA BT1A 1 1993 O:1,2 BT2 1 1993 SR22 XII-22 NA BT1A 2 1993 NA BT2 2 1993 SR26 XII-26 O:5 BT1A CLSP:A/95 H21 B25 SR24 XIII-24 O:9 BT2 1 1994 2-69 Hellsinky c SR25 XIII-25 O:8 BT2 ATCC 27729 SR26 XIII-26 O:21 BT1Ax Wc188 New York c O:4,32 BT1Ax 6249 New York c H22 B22 SR23 XIV NA BT2 1 1993 H23 B23 SR1 XV O:1,2a,3 BT3 CECT 559 H24 B24 SR1 XVI O:8 BT2 1 1994 CECT 4054 H25 B25 SR25 XVII O:13,7 BT1Ax 81-Y Barcelona c Open in a separate window a CECT, Colección Española de Cultivos Tipo; CLSP, Colección del Laboratorio de Salud Pública del Principado de Asturias. b Includes a strain collected before 1993 in a hospital of the Principality of Asturias. c Reference strains kindly provided by R. Diaz, Hospital Universitario de Navarra, Pamplona, Spain.

Techniques: Generated, Amplification

Journal: Cells

Article Title: Identification and Characterization of a Novel Species of Genus Akkermansia with Metabolic Health Effects in a Diet-Induced Obesity Mouse Model

doi: 10.3390/cells11132084

Figure Lengend Snippet: Susceptibility of Akkermansia sp. DSM 33459 to selected antimicrobials using YCFAC broth or RMFC agar (fosfomycin).

Article Snippet: Susceptibility of the quality control strain Bacteroides fragilis DSM 2151 (ATCC 25285) to selected antimicrobials using YCFAC broth (growth medium for Akkermansia sp. DSM 33459).

Techniques: